med-cloud 3.5.1-ok1 (amd64 binary) in openkylin yangtze
This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences, that do not
depend on graphical toolkits and therefore can fit on system images for use
in cloud computing clusters, where space can be limited.
Details
- Package version:
- 3.5.1-ok1
- Status:
- Deleted
- Component:
- main
- Priority:
- Optional
Downloadable files
amd64 build of debian-med 3.5.1-ok1 in openkylin yangtze PROPOSED produced
these files:
- med-cloud_3.5.1-ok1_all.deb (3.8 KiB)
Package relationships
- Depends on:
- Recommends:
- abyss
- acedb-other
- aevol
- alien-hunter
- altree
- amap-align
- ampliconnoise
- anfo
- aragorn
- arden
- autodock
- autodock-vina
- autogrid
- bamtools
- bedtools
- bioperl
- bioperl-run
- biosquid
- blast2
- bowtie
- bowtie2
- boxshade
- bwa
- cain
- cassiopee
- cd-hit
- cdbfasta
- circos
- clearcut
- clonalframe
- clustalo
- clustalw
- concavity
- conservation-code
- datamash
- dialign
- dialign-tx
- disulfinder
- dnaclust
- dssp
- embassy-domainatrix
- embassy-domalign
- embassy-domsearch
- emboss
- exonerate
- fastdnaml
- fastlink
- fastqc
- fasttree
- fitgcp
- flexbar
- freecontact
- gasic
- genometools
- gff2aplot
- gff2ps
- giira
- glam2
- grinder
- gromacs
- hhsuite
- hisat2
- hmmer
- idba
- infernal
- jellyfish
- kalign
- kissplice
- last-align
- loki
- macs
- mafft
- mapsembler2
- maq
- melting
- minia
- mipe
- mira-assembler
- mlv-smile
- mothur
- mrbayes
- mummer
- muscle
- mustang
- ncbi-epcr
- ncbi-tools-bin
- ncoils
- neobio
- paraclu
- parsinsert
- perm
- phyml
- phyutility
- picard-tools
- plink
- poa
- prank
- prime-phylo
- primer3
- probabel
- probcons
- proda
- prodigal
- pynast
- python3-biomaj3-cli
- python3-biopython
- qiime
- r-bioc-hilbertvis
- r-cran-pvclust
- r-cran-qtl
- r-cran-vegan
- r-other-mott-happy.hbrem
- raster3d
- readseq
- rnahybrid
- rtax
- samtools
- seqan-apps
- sibsim4
- sigma-align
- sim4
- smalt
- snap
- soapdenovo
- soapdenovo2
- squizz
- sra-toolkit
- ssake
- staden-io-lib-utils
- t-coffee
- tabix
- theseus
- tigr-glimmer
- tree-puzzle
- vcftools
- velvet
- wise
- zalign
